Widespread presence of anthropogenic compounds in marine dissolved organic matter
Kalinski JC, Pakkir Mohamed Shah AK, Ruiz Brandão da Costa B, Farrell SP, Schellenberg L, Graves LG, Schramm T, Stincone P, Koester I, Stephens BM, Torres RR, Cancelada L, Utermann-Thüsing C, Quinlan ZA, Wegley Kelly L, Carlson CA, Castillo-Ilabaca C, Pantoja-Gutiérrez S, Beman MJ, Hartmann A, Aron A, Siwe Noundou X, Dorrington RA, Tasdemir D, Haas AF, Dorrestein PC, Nelson CE, Aluwihare LI, Wang M, Petras D#
Nature Geoscience, 2026

Native metabolomics identifies pteridines as ligands of bacterial CutA proteins that modulate its copper affinity
Wagner BC, Steuer-Lodd K, Geibel C, Stadelmann A, Rapp J, Link H, Schramm T, Boodaghian N, Hsiao A, Nussbaum E, Grenzendorfer HP,
Albrecht R, Hartmann MD, Forchhammer K, Selim KA#, Hughes CC#,

Petras D#
PNAS, 2025

High-frequency microfluidic fractionation for compound-resolved bioactivity-based metabolomics
Geibel C, Schubert J, Knoblauch S, Hernandez A, Boldt L, Schneider D, Lambidis S, Vitale GA, Fleischer J, Haussmann M, Gross H, Wang M, Brötz-Oesterhelt H#, Petras D#

Analytical Chemistry, 2025

Enhancing tandem mass spectrometry-based metabolite annotation with online chemical labeling

Vitale GA*, Xia SN*, Dührkop D, Zare Shahneh MR, Broetz-Oesterhelt H, Mast Y, Brungs C, Böcker S, Schmid R, Wang M, Hughes CC#, Petras D#

Nature Communications, 2025

Turf algae redefine the chemical landscape of temperate reefs, limiting kelp forest recovery

Farrell SP#, Petras D, Stincone P, Yiu DS, Burns JA, Shah AKP, Hartmann AC, Brady DC, Rasher DB

Science, 2025

Two-Dimensional Liquid Chromatography Tandem Mass Spectrometry Untangles the Deep Metabolome of Marine Dissolved Organic Matter

Papadopoulos Lambidis S, Schramm T, Steuer-Lodd K, Farrell S, Stincone P, Schmid R, Koester I, Torres RR, Dittmar T, Aluwihare LI, Simon C, Petras D#

Environmental Science & Technology, 2024

Statistical Analysis of Feature-based Molecular Networks from Non-Targeted Metabolomics Data

Pakkir Shah AK, Walter A, Ottosson F, Russo F, Navarro-Díaz M, Boldt J, Kalinski JC, Kontou EE, Elofson J, Polyzois A, González-Marín C, Farrell S, Aggerbeck MR, Pruksatrakul T, Chan N, Wang Y, Pöchhacker M, Brungs C, Cámara B, Caraballo-Rodríguez AM, Cumsille A, de Oliveira F, Dührkop K, El Abiead Y, Geibel C, Graves LG, Hansen M, Heuckeroth S, Knoblauch S, Kostenko A, Kuijpers MCM, Mildau K, Papadopoulos Lambidis S, Portal Gomes P, Schramm T, Steuer-Lodd K, Stincone P, Tayyab S, Vitale GA, Wagner BC, Xing S, Yazzie MT, Zuffa S, de Kruijff M, Beemelmanns C, Link H, Mayer C, van der Hooft J, Damiani T, Pluskal T, Dorrestein P, Stanstrup J, Schmid R, Wang M, Aron A, Ernst M#, Petras D#

Nature Protocols, 2024

​Native Metabolomics Identifies the Rivulariapeptolide Family of Protease Inhibitors

Reher R, T Aron AT, Fajtová P, Stincone P, Wagner B, Perez-Lorente A, Liu C, Ben Shalom IY, Bittremieux W, Wang M, Matos-Hernandez ML, Alexander KL, Caro-Diaz EJ, Naman CB, William Scanlan JH, Hochban PMM, Diederich WE, Molina-Santiago C, Romero D, Selim K, Sass P, Brötz-Oesterhelt H, Hughes CC, Dorrestein PC, O'Donoghue AJ, Gerwick WH#, Petras D#

Nature Communications, 2022